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The Resource Plant bioinformatics : methods and protocols, edited by David Edwards

Plant bioinformatics : methods and protocols, edited by David Edwards

Label
Plant bioinformatics : methods and protocols
Title
Plant bioinformatics
Title remainder
methods and protocols
Statement of responsibility
edited by David Edwards
Contributor
Subject
Language
eng
Summary
Bioinformatics is a new and rapidly evolving field of research that is being driven by the development and application of various 'omics technologies. Plant Bioinformatics focuses on applied bioinformatics with specific applications to crops and model plants. Chapters in this new volume are aimed at researchers developing bioinformatics databases and tools, detailing commonly applied database formats and biology-focused scripting languages. These will provide both beginners and experienced bioinformatics researchers with the necessary skills to develop and apply bioinformatics tools for their specialist area of plant research. Each chapter includes practical examples and highlight common problems encountered in bioinformatics analysis. Protocols in this volume detail EMBL Nucleotide Sequence, TAIR database, VarvEST, MIPS, BGI-RIS V2, BarleyBase/PLEXdb, SAGE, KEGG, and more. Plant biologists who have an interest in or requirement for the accessing and manipulation of the huge amount of data being generated by high throughput technologies will find this new volume to be an immeasurable aid in their research
Member of
Cataloging source
VVL
Illustrations
illustrations
Index
index present
Language note
English
Literary form
non fiction
Nature of contents
  • dictionaries
  • bibliography
Series statement
Methods in molecular biology
Series volume
v. 406
Plant bioinformatics : methods and protocols, edited by David Edwards
Label
Plant bioinformatics : methods and protocols, edited by David Edwards
Link
http://libproxy.rpi.edu/login?url=http://link.springer.com/10.1007/978-1-59745-535-0
Publication
Related Contributor
Related Location
Related Agents
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Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
The EMBL nucleotide sequence and genome reviews databases / Peter Sterk [and others] -- Using GenBank / David Wheeler -- A collection of plant-specific genomic data and resources at NCBI / Tatiana Tatusova, Brian Smith-White, and James Ostell -- UniProtKB/Swiss-Prot / Emmanuel Boutet [and others] -- Plant database resources at The Institute for Genomic Research / Agnes P. Chan [and others] -- MIPS plant genome information resources / Manuel Spannagl [and others] -- HarvEST / Timothy J. Close [and others] -- The TAIR database / Rebecca L. Poole -- AtEnsEMBL / Nick James [and others] -- Accessing integrated Brasica genetic and genomic data using the BASC server / Christopher G. Love and David Edwards -- Leveraging model legume information to find candidate genes for soybean sudden death syndrome using the Legume Information System / Michael D. Gonzales [and others] -- Legume resources : MtDB and Medicago.org / Ernest F. Retzel [and others] -- BGI-RIS V2 / Ximiao He and Jun Wang -- GrainGenes / Helen O'Sullivan -- Gramene / Doreen Ware -- MaizGDB / Carolyn J. Lawrence -- BarleyBase/PLEXdb / Roger P. Wise [and others] -- Reaping the benefits of SAGE / Stephen J. Robinson [and others] -- Methods for analysis of gene expression in plants using MPSS / Kan Nobuta, Kalyan Vemaraju, and Blake C. Meyers -- Metabolomics data analysis, visualization, and integration / Lloyd W. Sumner, Ewa Urbanczyk-Wochniak, and Corey D. Broeckling -- KEGG bioinformatics resource for plant genomics research / Ali Masoudi-Nejad [and others] -- International Crop Information System for germplasms data management / Arllet Portugal [and others] -- Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers / Jacqueline Batley, Erica Jewell, and David Edwards -- Methods for gene ontology annotation / Emily Dimmer [and others] -- Gene structure annotation at PlantGDB / Volker Brendel -- An introduction to BioPerl / Jason E. Stajich
http://library.link/vocab/cover_art
https://contentcafe2.btol.com/ContentCafe/Jacket.aspx?Return=1&Type=S&Value=9781597455350&userID=ebsco-test&password=ebsco-test
Dimensions
unknown
http://library.link/vocab/discovery_link
{'f': 'http://opac.lib.rpi.edu/record=b3357257'}
Extent
1 online resource (xv, 552 pages)
Form of item
online
Isbn
9781597455350
Lccn
2007933141
Media category
computer
Media MARC source
rdamedia
Media type code
c
Other physical details
illustrations.
Sound
unknown sound
Specific material designation
remote

Library Locations

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      42.729766 -73.682577
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