Coverart for item
The Resource Modeling Cellular Systems

Modeling Cellular Systems

Label
Modeling Cellular Systems
Title
Modeling Cellular Systems
Creator
Contributor
Subject
Language
eng
Member of
Cataloging source
MiAaPQ
Literary form
non fiction
Nature of contents
dictionaries
Series statement
Contributions in Mathematical and Computational Sciences
Series volume
v.11
Modeling Cellular Systems
Label
Modeling Cellular Systems
Link
http://libproxy.rpi.edu/login?url=https://ebookcentral.proquest.com/lib/rpi/detail.action?docID=4856413
Publication
Copyright
Related Contributor
Related Location
Related Agents
Related Authorities
Related Subjects
Related Items
Carrier category
online resource
Carrier category code
cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
  • Preface -- Organisation -- Programme Chairs -- Contents -- 1 Spatiotemporal Modeling of Membrane Receptors -- 1 Introduction -- 1.1 Background: Chemical Reaction Networks, ODE Simulations -- 2 Reactions (Stochastic) -- 2.1 Dealing with the Molecular Nature of Chemical Reactions -- 2.2 Stochastic Simulation Algorithm -- 3 Diffusion -- 3.1 Diffusion Basics -- 3.2 Brownian or Not Brownian? -- 3.3 Brownian Motion Based Simulations -- 3.4 Anomalous Diffusion/Barriers to Movement -- 4 Reaction--Diffusion Systems -- 4.1 First-Order Reactions and Diffusion -- 4.2 Second-Order Reactions -- 4.3 Smoluchowski Model---Binding Radius Approach to Bimolecular Reactions -- 5 Conclusion -- References -- 2 Distribution Approximations for the Chemical Master Equation: Comparison of the Method of Moments and the System Size Expansion -- 1 Introduction -- 2 Stochastic Chemical Kinetics -- 3 Method of Moments -- 3.1 Equations for Conditional Moments -- 3.2 Maximum Entropy Distribution Reconstruction -- 4 System Size Expansion of the Probability Distribution -- 5 Results -- 5.1 Example 1: Bursty Protein Production -- 5.2 Example 2: Cooperative Self-Activation of Gene Expression -- 5.3 Comparison of Numerical Results -- 6 Discussion -- References -- 3 Sampling from T Cell Receptor Repertoires -- 1 Introduction -- 1.1 Sampling from a Repertoire -- 2 Results -- 2.1 The Mean Number of Repeats -- 2.2 Number of Draws to Find the First Repeat -- 2.3 Poisson Distribution of Number of Repeats in a Sample -- 2.4 Estimating the Size of the Repertoire from One Repeat -- 2.5 The Observed Distribution of Clonal Sizes -- 2.6 Expansion of a Fraction of the Repertoire -- 3 Discussion -- References -- 4 IL-2 Stimulation of Regulatory T Cells: A Stochastic and Algorithmic Approach -- 1 Introduction -- 2 Stochastic Model -- 3 Stochastic Descriptors
  • 3.1 Time to Reach a Threshold Number of Bound Complexes on the Cell Surface -- 3.2 Number of Receptors Synthesised During the Time to Reach a Threshold Number of Bound Complexes on the Cell Surface -- 4 Numerical Results -- 5 Discussion -- References -- 5 Understanding the Role of Mitochondria Distribution in Calcium Dynamics and Secretion in Bovine Chromaffin Cells -- 1 Introduction -- 2 Experimental Results -- 2.1 Experimental Materials and Methods -- 2.2 Mitochondria Distribution in Bovine Chromaffin Cells in Culture -- 3 Theoretical Model -- 3.1 Modeling Mitochondria as Obstacles for Diffusion of Calcium Ions -- References -- 6 Dynamical Features of the MAP Kinase Cascade -- 1 Introduction -- 2 The Simple Futile Cycle -- 3 The Dual Futile Cycle -- 4 The MAPK Cascade -- 5 Embedding the Cascade in Feedback Loops -- 6 Alternative Phosphorylation Mechanisms -- 7 Summary and Outlook -- References -- 7 Numerical Treatment of the Filament-Based Lamellipodium Model (FBLM) -- 1 Introduction -- 2 Mathematical Modeling -- 3 Numerical Method -- 3.1 Reparametrization -- 3.2 The Finite Element Formulation -- 3.3 Time Discretization -- Implementation Issues -- 4 Numerical Simulations -- 4.1 Experiment 1: Strongly Versus Weakly Adhesive Stripes -- 4.2 Experiment 2: Less-Adhesive Spikes on Strongly Adhesive Ground -- 4.3 Parameters Values -- References -- Author Index
http://library.link/vocab/cover_art
https://contentcafe2.btol.com/ContentCafe/Jacket.aspx?Return=1&Type=S&Value=9783319458335&userID=ebsco-test&password=ebsco-test
Dimensions
unknown
http://library.link/vocab/discovery_link
{'f': 'http://opac.lib.rpi.edu/record=b4388081'}
Extent
1 online resource (167 pages)
Form of item
online
Isbn
9783319458335
Media category
computer
Media MARC source
rdamedia
Media type code
c
Sound
unknown sound
Specific material designation
remote

Library Locations

    • Folsom LibraryBorrow it
      110 8th St, Troy, NY, 12180, US
      42.729766 -73.682577
Processing Feedback ...