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The Resource Immunoinformatics, edited by Rajat K. De, Namrata Tomar

Immunoinformatics, edited by Rajat K. De, Namrata Tomar

Label
Immunoinformatics
Title
Immunoinformatics
Statement of responsibility
edited by Rajat K. De, Namrata Tomar
Contributor
Editor
Editor
Subject
Language
eng
Summary
"Content and General Outline of the Book. We have tried to make this edition of the book self-contained. In principle, it aims at students and researchers from diverse background and levels interested in working with immunological problems. It provides biological insights into a certain extent as well as a simpler way to implement approaches and algorithms in the immunoinformatics research domain. There are 30 chapters distributed in five sections that cover various aspects of basic immunology to immunoinformatics. Part I is dedicated to describing the transition from basic and traditional immunology to immunoinformatics. It includes three chapters that introduce a basic immune system, its interaction with metabolic machinery, and informatics related to immune system. Part II contains comprehensive detail on most of the existing databases related to an immune system and its components. Similarly, most of the possible approaches/tools/algorithms for the prediction of T/B-cell epitopes, allergenic proteins, and virulence factors are described in Part III. In Part IV, systems biology approaches in the immunoinformatics domain have been explained, particularly for inflammation and personalized medicine. Part V deals with some applications of immunoinformatics research. In this section, we have provided applications of immunoinformatics in cancer diagnosis and therapy, HIV pathogenesis, and methods to investigate the mechanisms of host-pathogen interactions. Part V also includes the description of the role of structure-based clustering of MHC molecules as well as small RNA in vaccine designing."--Preface, page viii
Member of
Cataloging source
GW5XE
Illustrations
illustrations
Index
index present
Literary form
non fiction
Nature of contents
  • dictionaries
  • bibliography
Series statement
Methods in molecular biology,
Series volume
Volume No. 1184
Immunoinformatics, edited by Rajat K. De, Namrata Tomar
Label
Immunoinformatics, edited by Rajat K. De, Namrata Tomar
Link
http://libproxy.rpi.edu/login?url=http://link.springer.com/10.1007/978-1-4939-1115-8
Publication
Copyright
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Related Location
Related Agents
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Antecedent source
unknown
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
txt
Content type MARC source
rdacontent
Contents
  • 3.
  • Immunoinformatics: A Brief Review
  • Namrata Tomar and Rajat K. De
  • PART I.
  • IMMUNOINFORMATICS: TRANSITION FROM BASIC BIOLOGY TO INFORMATICS
  • 1.
  • A Brief Outline of the Immune System
  • Namrata Tomar and Rajat K. De
  • 2.
  • Cross Talk Between the Metabolic and Immune Systems
  • Namrata Tomar and Rajat K. De
  • 6.
  • Databases for T-Cell Epitopes
  • Chun-Wei Tung
  • 7.
  • Databases for B-Cell Epitopes
  • Juan Liu and Wen Zhang
  • 8.
  • Antigen-Antibody Interaction Database (AgAbDb): A Compendium of Antigen-Antibody Interactions
  • Urmila Kulkarni-Kale, Snehal Raskar-Renuse, Girija Natekar-Kalantre, and Smita A. Saxena
  • 9.
  • PART II.
  • Allergen Databases
  • Gaurab Sircar, Debasree Sarkar, Swati Gupta Bhattacharya, and Sudipto Saha
  • DATABASES
  • 4.
  • Immunoinformatics of the V, C, and G Domains: IMGT® Definitive System for IG, TR and IgSF, MH, and MhSF
  • Marie-Paule Lefranc
  • 5.
  • IMGT/HLA and the Immuno Polymorphism Database
  • James Robinson, Jason A. Halliwell, and Steven G.E. Marsh
  • 12.
  • Machine Learning-Based Methods for Prediction of Linear B-Cell Epitopes
  • Hsin-Wei Wang and Tun-Wen Pai
  • 13.
  • Mimotope-Based Prediction of B-Cell Epitopes
  • Jian Huang, Bifang He, and Peng Zhou
  • 14.
  • Hybrid Methods for B-Cell Epitope Prediction
  • Salvador Eugenio C. Caoili
  • 15.
  • PART III.
  • Building Classifier Ensembles for B-Cell Epitope Prediction
  • Yasser EL-Manzalawy and Vasant Honavar
  • 16.
  • Multiplex Peptide-Based B Cell Epitope Mapping
  • Sanne M.M. Hensen, Merel Derksen, and Ger J.M. Pruijn
  • 17.
  • Classification of Human Leukocyte Antigen (HLA) Supertypes
  • Mingjun Wang and Mogens H. Claesson
  • 18.
  • Customized Predictions of Peptide-MHC Binding and T-Cell Epitopes Using EPIMHC
  • TOOLS FOR PREDICTION
  • Magdalena Molero-Abraham, Esther M. Lafuente, and Pedro Reche
  • 19.
  • T-Cell Epitope Prediction Methods: An Overview
  • Dattatraya V. Desai and Urmila Kulkarni-Kale
  • 20.
  • Computational Antigenic Epitope Prediction by Calculating Electrostatic Desolvation Penalties of Protein Surfaces
  • Sébastien Fiorucci and Martin Zacharias
  • 21.
  • In Silico Prediction of Allergenic Proteins
  • Gaurab Sircar, Bodhisattwa Saha, Swati Gupta Bhattacharya, and Sudipto Saha
  • 10.
  • 22.
  • Prediction of Virulence Factors Using Bioinformatics Approaches
  • Rupanjali Chaudhuri and Srinivasan Ramachandran
  • Prediction of Conformational B-Cell Epitopes
  • Wen Zhang, Yanqing Niu, Yi Xiong, and Meng Ke
  • 11.
  • Computational Prediction of B Cell Epitopes from Antigen Sequences
  • Jianzhao Gao and Lukasz Kurgan
  • 25.
  • Immunoinformatics and Systems Biology in Personalized Medicine
  • Guillermo Lopez-Campos, Jesús F. Bermejo-Martin, Raquel Almansa, and Fernando Martin-Sanchez
  • PART IV.
  • SYSTEMS BIOLOGY APPROACHES IN IMMUNOINFORMATICS
  • 23.
  • A Systems Biology Approach to Study Systemic Inflammation
  • Bor-Sen Chen and Chia-Chou Wu
  • 24.
  • Procedures for Mucosal Immunization and Analyses of Cellular Immune Response to Candidate HIV Vaccines in Murine and Nonhuman Primate Models
  • Shailbala Singh, Pramod Nehete, Patrick Hanley, Bharti Nehete, Guojun Yang, Hong He, Scott M. Anthony, Kimberly S. Schluns, and K. Jagannadha Sastry
  • 28.
  • Immunoinformatics, Molecular Modeling, and Cancer Vaccine
  • Seema Mishra and Subrata Sinha
  • 29.
  • Investigating Host-Pathogen Behavior and Their Interaction Using Genome-Scale Metabolic Network Models
  • Priyanka P. Sadhukhan and Anu Raghunathan
  • 30.
  • Mathematical Models of HIV Replication and Pathogenesis
  • Dominik Wodarz
  • PART V.
  • APPLICATIONS OF IMMUNOINFORMATICS
  • 26.
  • The Role of Small RNAs in Vaccination
  • Ajeet Chaudhary and Sunil Kumar Mukherjee
  • 27.
  • Structure-Based Clustering of Major Histocompatibility Complex (MHC) Proteins for Broad-Based T-Cell Vaccine Design
  • Joo Chuan Tong, Tin Wee Tan, and Shoba Ranganathan
http://library.link/vocab/cover_art
https://contentcafe2.btol.com/ContentCafe/Jacket.aspx?Return=1&Type=S&Value=9781493911158&userID=ebsco-test&password=ebsco-test
Dimensions
unknown
http://library.link/vocab/discovery_link
{'f': 'http://opac.lib.rpi.edu/record=b3566275'}
Edition
Second Edition.
Extent
1 online resource (xix, 586 pages)
File format
unknown
Form of item
online
Isbn
9781493911158
Lccn
2014942969
Level of compression
unknown
Media category
computer
Media MARC source
rdamedia
Media type code
c
Other physical details
illustrations (chiefly color)
Quality assurance targets
not applicable
Reformatting quality
unknown
Sound
unknown sound
Specific material designation
remote

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